Well, what I ended up doing was using some pipe insulation, we use it on our pex pipe, around 190 degrees, and seems rather stable, says melting temp of about 300, so hopefully it works alright, just cut two thin disks from the 1/2" wrap and put it over the tubes and mounted the box; got rid of the gap. Total cost about $5 for a 4ft section(and only used like 2 inches) much better then $20 for a roll of the windshield seal.
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